C. Abergel, S. Chenivesse, D. Byrne, K. Suhre, V. Arondel et al., Mimivirus TyrRS: preliminary structural and functional characterization of the first amino-acyl tRNA synthetase found in a virus, Acta Crystallographica Section F Structural Biology and Crystallization Communications, vol.61, issue.2, 2005.
DOI : 10.1107/S174430910500062X

C. Abergel, J. Rudinger-thirion, R. Giege, C. , and J. M. , Virus-Encoded Aminoacyl-tRNA Synthetases: Structural and Functional Characterization of Mimivirus TyrRS and MetRS, Journal of Virology, vol.81, issue.22, pp.12406-12417, 2007.
DOI : 10.1128/JVI.01107-07

URL : https://hal.archives-ouvertes.fr/hal-00199127

S. Aherfi, M. Boughalmi, I. Pagnier, G. Fournous, L. Scola et al., Complete genome sequence of Tunisvirus, a new member of the proposed family Marseilleviridae, Archives of Virology, vol.36, issue.9, pp.2349-2358, 2014.
DOI : 10.1007/s00705-014-2023-5

S. Azza, C. Cambillau, D. Raoult, and M. Suzan-monti, Revised Mimivirus major capsid protein sequence reveals intron-containing gene structure and extra domain, BMC Molecular Biology, vol.10, issue.1, pp.39-49, 2009.
DOI : 10.1186/1471-2199-10-39

G. L. Blatch and M. Lassle, The tetratricopeptide repeat: a structural motif mediating protein-protein interactions, 11<932::AID-BIES5>3.0.CO, pp.1521-1878, 1999.

M. Boughalmi, H. Saadi, I. Pagnier, P. Colson, G. Fournous et al., High-throughput isolation of giant viruses of the Mimiviridae and Marseilleviridae families in the Tunisian environment, Environ. Microbiol, vol.15, 2000.

M. Boyer, S. Azza, L. Barrassi, T. Klose, A. Campocasso et al., Mimivirus shows dramatic genome reduction after intraamoebal culture, Proceedings of the National Academy of Sciences, vol.108, issue.25, pp.10296-10301, 2011.
DOI : 10.1073/pnas.1101118108

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3121840

M. Boyer, G. Gimenez, M. Suzan-monti, R. , and D. , Classification and Determination of Possible Origins of ORFans through Analysis of Nucleocytoplasmic Large DNA Viruses, Intervirology, vol.53, issue.5, pp.310-320, 2010.
DOI : 10.1159/000312916

M. Boyer, N. Yutin, I. Pagnier, L. Barrassi, G. Fournous et al., Giant Marseillevirus highlights the role of amoebae as a melting pot in emergence of chimeric microorganisms, Proceedings of the National Academy of Sciences, vol.106, issue.51, pp.21848-21853, 2009.
DOI : 10.1073/pnas.0911354106

M. A. Callahan, M. A. Handley, Y. H. Lee, K. J. Talbot, J. W. Harper et al., Functional interaction of human immunodeficiency virus type 1 Vpu and Gag with a novel member of the tetratricopeptide repeat protein family, J. Virol, vol.72, pp.5189-5197, 1998.

J. Castresana, Selection of Conserved Blocks from Multiple Alignments for Their Use in Phylogenetic Analysis, Molecular Biology and Evolution, vol.17, issue.4, 2000.
DOI : 10.1093/oxfordjournals.molbev.a026334

P. Colson, X. De-lamballerie, N. Yutin, S. Asgari, Y. Bigot et al., ???Megavirales???, a proposed new order for eukaryotic nucleocytoplasmic large DNA viruses, Archives of Virology, vol.11, issue.12, pp.2517-2521, 2013.
DOI : 10.1007/s00705-013-1768-6

P. Colson, N. Yutin, S. A. Shabalina, C. Robert, G. Fournous et al., Viruses with More Than 1,000 Genes: Mamavirus, a New Acanthamoeba polyphaga mimivirus Strain, and Reannotation of Mimivirus Genes, Genome Biology and Evolution, vol.3, issue.0, pp.737-742, 2006.
DOI : 10.1093/gbe/evr048

D. 'andrea, L. D. , R. , and L. , TPR proteins: the versatile helix, Trends in Biochemical Sciences, vol.28, issue.12, pp.655-662, 2003.
DOI : 10.1016/j.tibs.2003.10.007

A. K. Das, P. W. Cohen, and D. Barford, The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions, The EMBO Journal, vol.17, issue.5, pp.1192-1199, 1998.
DOI : 10.1093/emboj/17.5.1192

M. G. Fischer, M. J. Allen, W. H. Wilson, and C. A. Suttle, Giant virus with a remarkable complement of genes infects marine zooplankton, Proc. Natl, 2010.
DOI : 10.1073/pnas.1007615107

P. Forterre, Giant Viruses: Conflicts in Revisiting the Virus Concept, Intervirology, vol.53, issue.5, pp.362-378, 2010.
DOI : 10.1159/000312921

URL : https://hal.archives-ouvertes.fr/hal-00506365

O. N. Jensen, T. Houthaeve, A. Shevchenko, S. Cudmore, T. Ashford et al., Identification of the major membrane and core proteins of vaccinia virus by two-dimensional electrophoresis, J. Virol, vol.70, pp.7485-7497, 1996.

A. Jeshtadi, P. Burgos, C. D. Stubbs, A. W. Parker, L. A. King et al., Interaction of Poxvirus Intracellular Mature Virion Proteins with the TPR Domain of Kinesin Light Chain in Live Infected Cells Revealed by Two-Photon-Induced Fluorescence Resonance Energy Transfer Fluorescence Lifetime Imaging Microscopy, Journal of Virology, vol.84, issue.24, pp.12886-12894, 1128.
DOI : 10.1128/JVI.01395-10

T. Klose, Y. G. Kuznetsov, C. Xiao, S. Sun, A. Mcpherson et al., The Three-Dimensional Structure of Mimivirus, Intervirology, vol.53, issue.5, pp.268-273, 1159.
DOI : 10.1159/000312911

Y. G. Kuznetsov, C. Xiao, S. Sun, D. Raoult, M. Rossmann et al., Atomic force microscopy investigation of the giant mimivirus, Virology, vol.404, issue.1, pp.127-137, 2010.
DOI : 10.1016/j.virol.2010.05.007

M. A. Larkin, G. Blackshields, N. P. Brown, R. Chenna, P. A. Mcgettigan et al., Clustal W and Clustal X version 2.0, Bioinformatics, vol.23, issue.21, pp.2947-2948, 2007.
DOI : 10.1093/bioinformatics/btm404

URL : https://hal.archives-ouvertes.fr/hal-00206210

L. Scola, B. Audic, S. Robert, C. Jungang, L. De-lamballerie et al., A Giant Virus in Amoebae, Science, vol.299, issue.5615, 2003.
DOI : 10.1126/science.1081867

L. Scola, B. Desnues, C. Pagnier, I. Robert, C. Barrassi et al., The virophage as a unique parasite of the giant mimivirus, Nature, vol.32, issue.7209, pp.100-104, 1038.
DOI : 10.1038/nature07218

URL : https://hal.archives-ouvertes.fr/hal-00354651

M. Legendre, J. Bartoli, L. Shmakova, S. Jeudy, K. Labadie et al., Thirty-thousand-year-old distant relative of giant icosahedral DNA viruses with a pandoravirus morphology, Proceedings of the National Academy of Sciences, vol.111, issue.11, pp.4274-4279, 2014.
DOI : 10.1073/pnas.1320670111

J. Y. Lin, V. Mendu, J. Pogany, J. Qin, and P. D. Nagy, The TPR Domain in the Host Cyp40-like Cyclophilin Binds to the Viral Replication Protein and Inhibits the Assembly of the Tombusviral Replicase, PLoS Pathogens, vol.76, issue.2, 2012.
DOI : 10.1371/journal.ppat.1002491.s006

D. Moreira and C. Brochier-armanet, Giant viruses, giant chimeras: The multiple evolutionary histories of Mimivirus genes, BMC Evolutionary Biology, vol.8, issue.1, pp.12-22, 2008.
DOI : 10.1186/1471-2148-8-12

URL : https://hal.archives-ouvertes.fr/hal-00698068

N. Philippe, M. Legendre, G. Doutre, Y. Coute, O. Poirot et al., Pandoraviruses: Amoeba Viruses with Genomes Up to 2.5 Mb Reaching That of Parasitic Eukaryotes, Science, vol.341, issue.6143, pp.281-286, 2013.
DOI : 10.1126/science.1239181

URL : https://hal.archives-ouvertes.fr/cea-00862677

F. Piacente, M. Marin, A. Molinaro, C. De-castro, V. Seltzer et al., Giant DNA Virus Mimivirus Encodes Pathway for Biosynthesis of Unusual Sugar 4-Amino-4,6-dideoxy-D-glucose (Viosamine), Journal of Biological Chemistry, vol.287, issue.5, pp.3009-3018, 2012.
DOI : 10.1074/jbc.M111.314559

M. N. Price, P. S. Dehal, and A. P. Arkin, FastTree 2 ??? Approximately Maximum-Likelihood Trees for Large Alignments, PLoS ONE, vol.5, issue.3, 2010.
DOI : 10.1371/journal.pone.0009490.s003

D. Raoult, P. Forterre, P. Renesto, C. Abergel, P. Decloquement et al., Redefining viruses: lessons from Mimivirus, Nature Reviews Microbiology, vol.79, issue.4, pp.315-319, 1038.
DOI : 10.1038/nrmicro1858

URL : https://hal.archives-ouvertes.fr/hal-00297223

H. Saadi, I. Pagnier, P. Colson, J. K. Cherif, M. Beji et al., First Isolation of Mimivirus in a Patient With Pneumonia, Clinical Infectious Diseases, vol.57, issue.4, pp.127-134, 2013.
DOI : 10.1093/cid/cit354

H. Saadi, D. G. Reteno, P. Colson, S. Aherfi, P. Minodier et al., Shan Virus: A New Mimivirus Isolated from the Stool of a Tunisian Patient with Pneumonia, Intervirology, vol.56, issue.6, pp.424-429, 2013.
DOI : 10.1159/000354564

H. Sobhy and P. Colson, Gemi: PCR Primers Prediction from Multiple Alignments, Comparative and Functional Genomics, vol.40, issue.12, article e96, pp.783138-783148, 2012.
DOI : 10.1093/nar/gkm234

URL : http://doi.org/10.1155/2012/783138

J. Tani, S. Shimamoto, K. Mori, N. Kato, K. Moriishi et al., /S100 proteins regulate HCV virus NS5A-FKBP8/FKBP38 interaction and HCV virus RNA replication, Liver International, vol.21, issue.7, pp.1008-1018, 2013.
DOI : 10.1111/liv.12151

C. Xiao, Y. G. Kuznetsov, S. Sun, S. L. Hafenstein, V. A. Kostyuchenko et al., Structural Studies of the Giant Mimivirus, PLoS Biology, vol.50, issue.4, 2009.
DOI : 10.1371/journal.pbio.1000092.g007

N. Yoosuf, N. Yutin, P. Colson, S. A. Shabalina, I. Pagnier et al., Related Giant Viruses in Distant Locations and Different Habitats: Acanthamoeba polyphaga moumouvirus Represents a Third Lineage of the Mimiviridae That Is Close to the Megavirus Lineage, Genome Biology and Evolution, vol.4, issue.12, pp.1324-1330, 2012.
DOI : 10.1093/gbe/evs109