D. Jenson and V. Szabo, Duke FHI Haiti Humanities Laboratory Student Research Team (2011) Cholera in Haiti and other Caribbean regions, 19th century, Emerg Infect Dis, vol.17, pp.2130-2135

R. Frerichs, P. Keim, R. Barrais, and R. Piarroux, Nepalese origin of cholera epidemic in Haiti, Clinical Microbiology and Infection, vol.18, issue.6, pp.158-163, 2012.
DOI : 10.1111/j.1469-0691.2012.03841.x

R. Hendriksen, L. Price, J. Schupp, J. Gillece, and R. Kaas, Population Genetics of Vibrio cholerae from Nepal in 2010: Evidence on the Origin of the Haitian Outbreak, mBio, vol.2, issue.4, pp.157-168, 2011.
DOI : 10.1128/mBio.00157-11

M. Periago, T. Frieden, J. Tappero, D. Cock, K. Aasen et al., Elimination of cholera transmission in Haiti and the Dominican Republic, The Lancet, vol.379, issue.9812, pp.12-13, 2012.
DOI : 10.1016/S0140-6736(12)60031-2

J. Andrews and S. Basu, Transmission dynamics and control of cholera in Haiti: an epidemic model, The Lancet, vol.377, issue.9773, pp.1248-1255, 2011.
DOI : 10.1016/S0140-6736(11)60273-0

A. Tuite, J. Tien, M. Eisenberg, D. Earn, and J. Ma, Cholera Epidemic in Haiti, 2010: Using a Transmission Model to Explain Spatial Spread of Disease and Identify Optimal Control Interventions, Annals of Internal Medicine, vol.154, issue.9, pp.593-601, 2011.
DOI : 10.7326/0003-4819-154-9-201105030-00334

E. Bertuzzo, L. Mari, L. Righetto, M. Gatto, and R. Casagrandi, Prediction of the spatial evolution and effects of control measures for the unfolding Haiti cholera outbreak, Geophysical Research Letters, vol.341, issue.4, p.6403, 2011.
DOI : 10.1029/2011GL046823

D. Chao, M. Halloran, and L. Imjr, Vaccination strategies for epidemic cholera in Haiti with implications for the developing world, Proceedings of the National Academy of Sciences, vol.108, issue.17, pp.7081-7085, 2011.
DOI : 10.1073/pnas.1102149108

Y. Grad, J. Miller, and M. Lipsitch, Cholera Modeling, Epidemiology, vol.23, issue.4, pp.523-553, 2012.
DOI : 10.1097/EDE.0b013e3182572581

A. Rinaldo, E. Bertuzzo, L. Mari, L. Righetto, and M. Blokesch, Reassessment of the 2010-2011 Haiti cholera outbreak and rainfall-driven multiseason projections, Proceedings of the National Academy of Sciences, vol.109, issue.17, pp.6602-6609, 2012.
DOI : 10.1073/pnas.1203333109

F. Osei and A. Duker, Spatial dependency of V. cholera prevalence on open space refuse dumps in Kumasi, Ghana: a spatial statistical modelling, International Journal of Health Geographics, vol.7, issue.1, p.62, 2008.
DOI : 10.1186/1476-072X-7-62

D. Bompangue, P. Giraudoux, M. Piarroux, G. Mutombo, and R. Shamavu, Cholera Epidemics, War and Disasters around Goma and Lake Kivu: An Eight-Year Survey, PLoS Neglected Tropical Diseases, vol.12, issue.5, p.436, 2009.
DOI : 10.1371/journal.pntd.0000436.s001

URL : https://hal.archives-ouvertes.fr/hal-00387069

B. Nkoko, D. Giraudoux, P. Plisnier, P. Tinda, A. Piarroux et al., Dynamics of cholera outbreaks in Great Lakes region of Africa, Emerg Infect Dis, vol.17, pp.2026-2034, 1978.
URL : https://hal.archives-ouvertes.fr/hal-00650525

F. Luquero, C. Banga, D. Remartínez, P. Palma, and E. Baron, Cholera Epidemic in Guinea-Bissau (2008): The Importance of ???Place???, PLoS ONE, vol.74, issue.9702, p.19005, 2011.
DOI : 10.1371/journal.pone.0019005.t001

D. Bompangue, P. Giraudoux, P. Handschumacher, M. Piarroux, and B. Sudre, Lakes as Source of Cholera Outbreaks, Democratic Republic of Congo, Emerging Infectious Diseases, vol.14, issue.5, pp.798-800, 2008.
DOI : 10.3201/eid1405.071260

URL : https://hal.archives-ouvertes.fr/hal-00341872

R. Piarroux, R. Barrais, B. Faucher, R. Haus, and M. Piarroux, Understanding the Cholera Epidemic, Haiti, Emerging Infectious Diseases, vol.17, issue.7, pp.1161-1168, 2011.
DOI : 10.3201/eid1707.110059

C. Bopp, A. Ries, and J. Wells, Laboratory methods for the diagnosis of epidemic dysentery and cholera GA: Centers for Disease Control and Prevention. 115 p. Available: http://www.cdc.gov/cholera/pdf/Laboratory- Methods-for-the-Diagnosis-of-Epidemic-Dysentery-and-Cholera.pdf, Atlanta, 1999.

J. Gaudart, R. Giorgi, B. Poudiougou, O. Touré, and S. Ranque, D??tection de??clusters spatiaux sans point source pr??d??fini: utilisation de??cinq??m??thodes et??comparaison de??leurs r??sultats, Revue d'??pid??miologie et de Sant?? Publique, vol.55, issue.4, pp.297-306, 2007.
DOI : 10.1016/j.respe.2007.04.003

M. Kulldorff, A spatial scan statistic, Communications in Statistics - Theory and Methods, vol.75, issue.6, pp.1481-1496, 1997.
DOI : 10.1093/biomet/74.3.631

B. Faucher, J. Gaudart, F. Faraut, C. Pomares, and C. Mary, Heterogeneity of Environments Associated with Transmission of Visceral Leishmaniasis in South-Eastern France and Implication for Control Strategies, PLoS Neglected Tropical Diseases, vol.6, issue.8, p.1765, 2012.
DOI : 10.1371/journal.pntd.0001765.t003

URL : https://hal.archives-ouvertes.fr/hal-01307771

M. Gatton, L. Kelly-hope, B. Kay, and P. Ryan, Spatial-temporal analysis of Ross River virus disease patterns in Queensland, Australia, Am J Trop Med Hyg, vol.71, pp.629-635, 2004.

D. Maraun, J. Kurths, and M. Holschneider, Nonstationary Gaussian processes in wavelet domain: Synthesis, estimation, and significance testing, Physical Review E, vol.75, issue.1, p.16707, 2007.
DOI : 10.1103/PhysRevE.75.016707

B. Cazelles, M. Chavez, G. Magny, J. Guégan, and S. Hales, Time-dependent spectral analysis of epidemiological time-series with wavelets, Journal of The Royal Society Interface, vol.4, issue.15, pp.625-636, 2007.
DOI : 10.1098/rsif.2007.0212

R. Shumway and D. Stoffer, Time series analysis and its applications, 2011.

C. De-magny, G. Guégan, J. Petit, M. Cazelles, and B. , Regional-scale climate-variability synchrony of cholera epidemics in West Africa, BMC Infectious Diseases, vol.3, issue.1, p.20, 2007.
DOI : 10.1007/s10393-006-0061-5

A. Jutla, A. Akanda, J. Griffiths, R. Colwell, and S. Islam, Warming Oceans, Phytoplankton, and River Discharge: Implications for Cholera Outbreaks, American Journal of Tropical Medicine and Hygiene, vol.85, issue.2, 2011.
DOI : 10.4269/ajtmh.2011.11-0181

M. Hashizume, L. Chaves, and N. Minakawa, Indian Ocean Dipole drives malaria resurgence in East African highlands, Scientific Reports, vol.3, p.269, 2012.
DOI : 10.1038/srep00269

S. Mora, A. Roumagnac, J. Asté, E. Calais, and J. Haase, Analysis of Multiple Natural Hazards in Haiti Workshop Rebuilding for Resilience: How Science and Engineering Can Inform Haiti's Reconstruction. Coral Gables, 2010.

S. Wood, Fast stable direct fitting and smoothness selection for generalized additive models, Journal of the Royal Statistical Society: Series B (Statistical Methodology), vol.6, issue.3, pp.495-518, 2008.
DOI : 10.1198/016214504000000980

N. Honório, R. Nogueira, C. Codeço, M. Carvalho, and O. Cruz, Spatial Evaluation and Modeling of Dengue Seroprevalence and Vector Density in Rio de Janeiro, Brazil, PLoS Neglected Tropical Diseases, vol.72, issue.11, p.545, 2009.
DOI : 10.1371/journal.pntd.0000545.s001

V. Hoef, J. Boveng, and P. , QUASI-POISSON VS. NEGATIVE BINOMIAL REGRESSION: HOW SHOULD WE MODEL OVERDISPERSED COUNT DATA?, Ecology, vol.61, issue.11, pp.2766-2772, 2007.
DOI : 10.2307/2265753

L. Fernández, M. Mason, P. Gray, H. Bauernfeind, A. Fesselet et al., Descriptive spatial analysis of the cholera epidemic 2008???2009 in Harare, Zimbabwe: a secondary data analysis, Transactions of the Royal Society of Tropical Medicine and Hygiene, vol.105, issue.1, pp.38-45, 2008.
DOI : 10.1016/j.trstmh.2010.10.001

C. Seas, J. Miranda, A. Gil, R. Leon-barua, and J. Patz, New insights on the emergence of the cholera in Latin America during 1991: the Peruvian experience, Am J Trop Med Hyg, vol.62, pp.513-517, 2000.

A. Cravioto, C. Lanata, D. Lantagne, B. Nair, and G. , Final Report of the Independent Panel of Experts on the Cholera Outbreak in Haiti, 2011.

R. Piarroux and B. Faucher, Cholera epidemics in 2010: respective roles of environment, strain changes, and human-driven dissemination, Clinical Microbiology and Infection, vol.18, issue.3, pp.231-238, 2012.
DOI : 10.1111/j.1469-0691.2012.03763.x

S. Dao, I. Konaté, A. Oumar, M. Sacko, and I. Maiga, Cholera epidemics in Mali between, Sante Publique, vol.21, pp.263-269, 1995.

C. Kyelem, A. Bougouma, R. Thiombiano, I. Salou-kagoné, and L. Sangaré, Cholera epidemic in Burkina Faso in 2005: epidemiologic and diagnostic aspects, Pan Afr Med J, vol.8, p.1, 2011.

M. Pascual, K. Koelle, and A. Dobson, Hyperinfectivity in Cholera: A New Mechanism for an Old Epidemiological Model?, PLoS Medicine, vol.102, issue.6, p.280, 2006.
DOI : 10.1371/journal.pmed.0030280

L. Mari, E. Bertuzzo, L. Righetto, R. Casagrandi, and M. Gatto, Modelling cholera epidemics: the role of waterways, human mobility and sanitation, Journal of The Royal Society Interface, vol.47, issue.3, pp.376-388, 2012.
DOI : 10.1016/j.tree.2008.10.007

R. Colwell, Infectious disease and environment: cholera as a paradigm for waterborne disease, Int Microbiol, vol.7, pp.285-289, 2004.

V. Hill, N. Cohen, A. Kahler, J. Jones, and C. Bopp, Toxigenic Vibrio cholerae O1 in Water and Seafood, Haiti, Emerging Infectious Diseases, vol.17, issue.11, pp.2147-50, 2011.
DOI : 10.3201/eid1711.110748

N. Hasan, S. Choi, M. Eppinger, P. Clark, and A. Chen, Genomic diversity of 2010 Haitian cholera outbreak strains, Proceedings of the National Academy of Sciences, vol.109, issue.29, pp.2010-2017, 2012.
DOI : 10.1073/pnas.1207359109

B. De-rochars, V. Tipret, J. Patrick, M. Jacobson, L. Barbour et al., Knowledge, Attitudes, and Practices Related to Treatment and Prevention of Cholera, Emerg Infect Dis, vol.17, pp.2158-2161, 2010.

G. Champetier-de-ribes, L. Rakotonjanabelo, R. Migliani, P. Pfister, and L. Rakotondramarina, One-year assessment of the cholera epidemic in Madagascar, Sante, vol.10, pp.277-286, 1999.