P. Uetz, L. Giot, G. Cagney, T. A. Mansfield, R. S. Judson et al., A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae, Nature, vol.403, issue.6770, pp.623-630, 2000.

T. Ito, T. Chiba, R. Ozawa, M. Yoshida, M. Hattori et al., A comprehensive two-hybrid analysis to explore the yeast protein interactome, Proc Natl Acad Sci U S A, vol.98, issue.8, pp.4569-74, 2001.
DOI : 10.1073/pnas.061034498

URL : http://www.pnas.org/content/98/8/4569.full.pdf

L. Giot, J. S. Bader, C. Brouwer, A. Chaudhuri, B. Kuang et al.,

M. Knight, J. Shimkets, R. A. Mckenna, M. P. Chant, J. Rothberg et al., A protein interaction map of Drosophila melanogaster, Science, vol.302, issue.5651, pp.1727-1763, 2003.

B. Schwikowski, P. Uetz, and S. Fields, A network of protein-protein interactions in yeast, Nat Biotechnol, vol.18, issue.12, pp.1257-61, 2000.

C. Brun, J. Wojcik, A. Guénoche, and B. Jacq, Bioinformatic study of interaction networks: PRODISTIN, a new method for a functionnal classification of proteins, Journées Ouvertes Biologie Informatique Mathématiques (JOBIM'2002, pp.171-182, 2002.

C. Brun, F. Chevenet, D. Martin, J. Wojcik, A. Guénoche et al., Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network, Genome Biol, vol.5, p.6, 2003.
URL : https://hal.archives-ouvertes.fr/hal-00311029

M. P. Samanta and S. Liang, Predicting protein functions from redundancies in large-scale protein interaction networks, Proc Natl Acad Sci, vol.100, issue.22, pp.12579-83, 2003.
DOI : 10.1073/pnas.2132527100

URL : http://www.pnas.org/content/100/22/12579.full.pdf

A. Vazquez, A. Flammini, A. Maritan, and A. Vespignani, Global protein function prediction from protein-protein interaction networks, Nat Biotechnol, vol.21, issue.6, pp.697-700, 2003.

G. D. Bader and C. W. Hogue, An automated method for finding molecular complexes in large protein interaction networks, BMC Bioinformatics, vol.4, issue.2, 2003.

J. Rougemont and P. Hingamp, DNA microarray data and contextual analysis of correlation graphs, BMC Bioinformatics, vol.4, p.15, 2003.
URL : https://hal.archives-ouvertes.fr/inserm-00115584

A. W. Rives and T. Galitski, Modular organization of cellular networks, Proc Natl Acad Sci U S A, vol.4, pp.1128-1133, 2003.
DOI : 10.1073/pnas.0237338100

URL : https://www.pnas.org/content/pnas/100/3/1128.full.pdf

B. K. Timblin, K. Tatchell, and L. W. Bergman, Deletion of the gene encoding the cyclin-dependent protein kinase Pho85 alters glycogen metabolism in Saccharomyces cerevisiae, Genetics, vol.143, pp.57-66, 1996.

A. H. Tong, G. Lesage, G. D. Bader, H. Ding, H. Xu et al., Global mapping of the yeast genetic interaction network, Science, vol.303, issue.5659, pp.808-821, 2004.