Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic Acids Research, vol.25, issue.17, pp.3389-3402, 1997. ,
DOI : 10.1093/nar/25.17.3389
(Mediophyceae, Bacillariophyta), a clonal chain forming diatom in the west coast of Korea, Mitochondrial DNA Part A, vol.28, issue.1, pp.549-550, 2016. ,
DOI : 10.1093/gbe/evv147
Repeat region absent in mitochondrial genome of tube-dwelling diatom Berkeleya fennica (Naviculales, Bacillariophyceae) Mitochondrial DNA Part A, pp.2137-2138, 2016. ,
Tandem repeats finder: a program to analyze DNA sequences, Nucleic Acids Research, vol.272, issue.5269, pp.573-580, 1999. ,
DOI : 10.1126/science.272.5269.1755
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data, Nature Methods, vol.472, issue.6, pp.563-569, 2013. ,
DOI : 10.1016/S0076-6879(10)72001-2
ProtTest 3: fast selection of best-fit models of protein evolution, Bioinformatics, vol.36, issue.Suppl. 2, pp.1164-1165, 2011. ,
DOI : 10.1146/annurev.ecolsys.36.102003.152633
MUSCLE: multiple sequence alignment with high accuracy and high throughput, Nucleic Acids Research, vol.32, issue.5, pp.1792-1797, 2004. ,
DOI : 10.1093/nar/gkh340
Estimating maximum likelihood phylogenies with PhyML Bioinformatics for DNA sequence analysis, pp.113-137, 2009. ,
The Rhodomonas salina mitochondrial genome: bacteria-like operons, compact gene arrangement and complex repeat region, Nucleic Acids Research, vol.33, issue.14, pp.4433-4442, 2005. ,
DOI : 10.1093/nar/gki757
Complete Sequence and Analysis of the Mitochondrial Genome of Hemiselmis andersenii CCMP644 (Cryptophyceae), BMC Genomics, vol.9, issue.1, p.215, 2008. ,
DOI : 10.1186/1471-2164-9-215
tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic Sequence, Nucleic Acids Research, vol.235, issue.4, pp.955-964, 1997. ,
DOI : 10.1006/jmbi.1994.1074
Studies on Asterionella: I. The Origin and Nature of the Cells Producing Seasonal Maxima, The Journal of Ecology, vol.37, issue.2, p.389, 1949. ,
DOI : 10.2307/2256614
Unipro UGENE: a unified bioinformatics toolkit, Bioinformatics, vol.25, issue.Suppl. 12, pp.1166-1167, 2012. ,
DOI : 10.1093/bioinformatics/btp033
Complete sequence of the mitochondrial genome of a diatom alga Synedra acus and comparative analysis of diatom mitochondrial genomes, Current Genetics, vol.31, issue.Suppl, pp.215-223, 2010. ,
DOI : 10.1080/0269249X.1996.9705372
Complex repeat structures and novel features in the mitochondrial genomes of the diatoms Phaeodactylum tricornutum and Thalassiosira pseudonana, Gene, vol.476, issue.1-2, pp.20-26, 2011. ,
DOI : 10.1016/j.gene.2011.02.001
TreeGraph 2: combining and visualizing evidence from different phylogenetic analyses, BMC Bioinformatics, vol.11, issue.7, 2010. ,