A. Varki, Essentials of glycobiology, 2009.

F. Lichtenthaler, Carbohydrates as renewable raw materials: a major challenge of green chemistry In Methods and reagents for green chemistry: an introduction, NJ: J, pp.23-63, 2007.

R. Laine, to development of single-method saccharide sequencing or synthesis systems, Glycobiology, vol.4, issue.6, pp.759-767, 1994.
DOI : 10.1093/glycob/4.6.759

N. Sharon, The conquest of the last frontier of molecular and cell biology., Biochimie, vol.83, issue.7, pp.555-555, 2001.
DOI : 10.1016/S0300-9084(01)01310-4

G. Davies, T. Gloster, and B. Henrissat, Recent structural insights into the expanding world of carbohydrate-active enzymes, Current Opinion in Structural Biology, vol.15, issue.6, pp.637-645, 2005.
DOI : 10.1016/j.sbi.2005.10.008

B. Henrissat, A classification of glycosyl hydrolases based on amino acid sequence similarities, Biochemical Journal, vol.280, issue.2, pp.309-316, 1991.
DOI : 10.1042/bj2800309
URL : https://hal.archives-ouvertes.fr/hal-00310263

G. Davies and M. Sinnott, Sorting the diverse: the sequence-based classifications of carbohydrate-active enzymes, Biochemical Journal, pp.1-5, 2008.
DOI : 10.1042/BJ20080382

B. Henrissat, M. Claeyssens, P. Tomme, L. Lemesle, and J. Mornon, Cellulase families revealed by hydrophobic cluster analysi, Gene, vol.81, issue.1, pp.83-95, 1989.
DOI : 10.1016/0378-1119(89)90339-9

C. Duan, L. Xian, G. Zhao, Y. Feng, H. Pang et al., Isolation and partial characterization of novel genes encoding acidic cellulases from metagenomes of buffalo rumens, Journal of Applied Microbiology, vol.84, issue.1, pp.245-256, 2009.
DOI : 10.1042/bj1210353

H. Elifantz, L. Waidner, V. Michelou, M. Cottrell, and D. Kirchman, Diversity and abundance of glycosyl hydrolase family 5 in the North Atlantic Ocean, FEMS Microbiology Ecology, vol.10, issue.3, pp.316-327, 2008.
DOI : 10.1016/j.dsr.2004.06.007

M. Hess, A. Sczyrba, R. Egan, T. Kim, H. Chokhawala et al., Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen, Science, vol.24, issue.10, pp.463-467, 2011.
DOI : 10.1038/nbt1247

B. Cantarel, P. Coutinho, C. Rancurel, T. Bernard, V. Lombard et al., The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics, Nucleic Acids Research, vol.140, issue.3, pp.233-238, 2009.
DOI : 10.1104/pp.105.072652

P. Béguin, Molecular Biology of Cellulose Degradation, Annual Review of Microbiology, vol.44, issue.1, pp.219-248, 1990.
DOI : 10.1146/annurev.mi.44.100190.001251

M. Hilge, S. Gloor, W. Rypniewski, O. Sauer, T. Heightman et al., High-resolution native and complex structures of thermostable ??-mannanase from Thermomonospora fusca ??? substrate specificity in glycosyl hydrolase family 5, Structure, vol.6, issue.11, pp.1433-1444, 1998.
DOI : 10.1016/S0969-2126(98)00142-7

L. Leggio, L. Larsen, and S. , endoglucanase: completing the structural picture of subfamilies in glycoside hydrolase family 5, FEBS Letters, vol.11, issue.1-3, pp.103-108, 2002.
DOI : 10.1002/prot.340110407

A. Larsson, L. Anderson, B. Xu, I. Munoz, I. Uson et al., Three-dimensional Crystal Structure and Enzymic Characterization of ??-Mannanase Man5A from Blue Mussel Mytilus edulis, Journal of Molecular Biology, vol.357, issue.5, pp.1500-1510, 2006.
DOI : 10.1016/j.jmb.2006.01.044

S. Costanzo, M. Ospina-giraldo, K. Deahl, C. Baker, and R. Jones, Alternate intron processing of family 5 endoglucanase transcripts from the genus Phytophthora, Current Genetics, vol.81, issue.3-4, pp.115-123, 2007.
DOI : 10.1042/bj2800309

R. Opassiri, B. Pomthong, T. Akiyama, M. Nakphaichit, T. Onkoksoong et al., L.) ??-glucosidase represents a new subfamily of glycosyl hydrolase family 5 containing a fascin-like domain, Biochemical Journal, vol.408, issue.2, pp.241-249, 2007.
DOI : 10.1042/BJ20070734

S. John, F. Gonzalez, J. Pozharski, and E. , Consolidation of glycosyl hydrolase family 30: A dual domain 4/7 hydrolase family consisting of two structurally distinct groups, FEBS Letters, vol.382, issue.21, pp.4435-4441, 2010.
DOI : 10.1042/BJ20040892

M. Stam, E. Danchin, C. Rancurel, P. Coutinho, and B. Henrissat, Dividing the large glycoside hydrolase family 13 into subfamilies: towards improved functional annotations of ??-amylase-related proteins, Protein Engineering Design and Selection, vol.19, issue.12, pp.555-562, 2006.
DOI : 10.1093/protein/gzl044

V. Lombard, T. Bernard, C. Rancurel, H. Brumer, P. Coutinho et al., A hierarchical classification of polysaccharide lyases for glycogenomics, Biochemical Journal, vol.271, issue.3, pp.437-444, 2010.
DOI : 10.4056/sigs.21137
URL : https://hal.archives-ouvertes.fr/hal-00539724

S. Hancock, J. Rich, M. Caines, N. Strynadka, and S. Withers, Designer enzymes for glycosphingolipid synthesis by directed evolution, Nature Chemical Biology, vol.72, issue.7, pp.508-514, 2009.
DOI : 10.1016/0005-2760(92)90184-W

E. Danchin, M. Rosso, P. Vieira, J. De-almeida-engler, P. Coutinho et al., Multiple lateral gene transfers and duplications have promoted plant parasitism ability in nematodes, Proceedings of the National Academy of Sciences, vol.50, issue.41, pp.17651-17656, 2010.
DOI : 10.1016/S0168-9525(00)02024-2

R. Acuña, B. Padilla, C. Flórez-ramos, J. Rubio, J. Herrera et al., Adaptive horizontal transfer of a bacterial gene to an invasive insect pest of coffee, Proc Natl Acad U S A 2012, pp.4197-4202
DOI : 10.1016/0076-6879(55)01021-5

A. Boraston, D. Bolam, H. Gilbert, and G. Davies, Carbohydrate-binding modules: fine-tuning polysaccharide recognition, Biochemical Journal, vol.382, issue.3, pp.769-781, 2004.
DOI : 10.1042/BJ20040892

Y. Zhao, Y. Zhang, Y. Cao, J. Qi, L. Mao et al., Structural Analysis of Alkaline ??-Mannanase from Alkaliphilic Bacillus sp. N16-5: Implications for Adaptation to Alkaline Conditions, PLoS ONE, vol.6, issue.1, p.14608, 2011.
DOI : 10.1371/journal.pone.0014608.s005

G. Suen, P. Weimer, D. Stevenson, F. Aylward, J. Boyum et al., The Complete Genome Sequence of Fibrobacter succinogenes S85 Reveals a Cellulolytic and Metabolic Specialist, PLoS ONE, vol.48, issue.4, p.18814, 2011.
DOI : 10.1371/journal.pone.0018814.s012

T. Sakamoto, Y. Taniguchi, S. Suzuki, H. Ihara, and H. Kawasaki, Characterization of Fusarium oxysporum ??-1,6-Galactanase, an Enzyme That Hydrolyzes Larch Wood Arabinogalactan, Applied and Environmental Microbiology, vol.73, issue.9, pp.3109-3112, 2007.
DOI : 10.1128/AEM.02101-06

E. Luonteri, C. Laine, S. Uusitalo, A. Teleman, M. Siika-aho et al., Purification and characterization of Aspergillus beta-D-galactanases acting on beta-1,4-and beta-1,3/6-linked arabinogalactans. Carbohyd Polym, pp.155-168, 2003.

D. Dodd, Y. Moon, K. Swaminathan, R. Mackie, and I. Cann, and Insights into Energy Acquisition by Xylanolytic Bacteroidetes, Journal of Biological Chemistry, vol.178, issue.39, pp.30261-30273, 2010.
DOI : 10.1093/nar/gkn663

H. Sugino, S. Furuichi, S. Murao, M. Arai, and T. Fujii, Having ??-1,3-Mannanase Activity, Bioscience, Biotechnology, and Biochemistry, vol.68, issue.3, pp.757-760, 2004.
DOI : 10.1271/bbb.68.757

M. Correia, K. Mazumder, J. Bras, S. Firbank, Y. Zhu et al., Structure and Function of an Arabinoxylan-specific Xylanase, Journal of Biological Chemistry, vol.331, issue.25, pp.22510-22520, 2011.
DOI : 10.1074/jbc.M110.217372

R. Deboy, E. Mongodin, D. Fouts, L. Tailford, H. Khouri et al., Insights into Plant Cell Wall Degradation from the Genome Sequence of the Soil Bacterium Cellvibrio japonicus, Journal of Bacteriology, vol.190, issue.15, pp.5455-5463, 2008.
DOI : 10.1128/JB.01701-07

M. Caines, M. Vaughan, C. Tarling, S. Hancock, R. Warren et al., Ganglioside-bound Forms, Journal of Biological Chemistry, vol.175, issue.19, pp.14300-14308, 2007.
DOI : 10.1016/j.jmb.2006.04.004

Y. Ishibashi, T. Nakasone, M. Kiyohara, Y. Horibata, K. Sakaguchi et al., A Novel Endoglycoceramidase Hydrolyzes Oligogalactosylceramides to Produce Galactooligosaccharides and Ceramides, Journal of Biological Chemistry, vol.377, issue.15, pp.11386-11396, 2007.
DOI : 10.1042/bj20031145

V. Zverlov, G. Velikodvorskaya, and W. Schwarz, A newly described cellulosomal cellobiohydrolase, CelO, from Clostridium thermocellum: investigation of the exo-mode of hydrolysis, and binding capacity to crystalline cellulose, Microbiology, vol.51, issue.1, pp.247-255, 2002.
DOI : 10.1007/s002530051473

M. Iakiviak, R. Mackie, and I. Cann, Functional analyses of multiple lichenindegrading enzymes from the rumen Bacterium Ruminococcus albus 8

K. Cho, S. Kim, J. Woo, J. Bok, and Y. Choi, Molecular cloning and expression of a novel family A endoglucanase gene from Fibrobacter succinogenes S85 in Escherichia coli, Enzyme and Microbial Technology, vol.27, issue.7, pp.475-481, 2000.
DOI : 10.1016/S0141-0229(00)00256-8

T. Tanabe, K. Morinaga, T. Fukamizo, and M. Mitsutomi, HUT 6037 with Transglycosylation Activity, Bioscience, Biotechnology, and Biochemistry, vol.67, issue.2, pp.354-364, 2003.
DOI : 10.1016/B978-0-12-780950-2.50015-0

I. Hong, H. Jang, S. Lee, and S. Choi, Cloning and characterization of a bifunctional cellulase-chitosanase gene from Bacillus licheniformis NBL420, J Microbiol Biotechnol, vol.13, pp.35-42, 2003.

M. Pedraza-reyes and F. Gutierrez-corona, The bifunctional enzyme chitosanase-cellulase produced by the gram-negative microorganism Myxobacter sp. AL-1 is highly similar to Bacillus subtilis endoglucanases, Archives of Microbiology, vol.168, issue.4, pp.321-327, 1997.
DOI : 10.1007/s002030050505

K. Yaoi, T. Nakai, Y. Kameda, A. Hiyoshi, and Y. Mitsuishi, Cloning and Characterization of Two Xyloglucanases from Paenibacillus sp. Strain KM21, Applied and Environmental Microbiology, vol.71, issue.12, pp.7670-7678, 2005.
DOI : 10.1128/AEM.71.12.7670-7678.2005

F. Foong and R. Doi, Characterization and comparison of Clostridium cellulovorans endoglucanases-xylanases EngB and EngD hyperexpressed in Escherichia coli., Journal of Bacteriology, vol.174, issue.4, pp.1403-1409, 1992.
DOI : 10.1128/jb.174.4.1403-1409.1992

R. Schroder, T. Wegrzyn, N. Sharma, and R. Atkinson, LeMAN4 endo-??-mannanase from ripe tomato fruit can act as a mannan transglycosylase or hydrolase, Planta, vol.200, issue.5, pp.1091-1102, 2006.
DOI : 10.1016/B978-0-12-461012-5.50017-3

A. Dilokpimol, H. Nakai, C. Gotfredsen, M. Baumann, N. Nakai et al., Recombinant production and characterisation of two related GH5 endo-??-1,4-mannanases from Aspergillus nidulans FGSC A4 showing distinctly different transglycosylation capacity, Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, vol.1814, issue.12, pp.1720-1729, 2011.
DOI : 10.1016/j.bbapap.2011.08.003

F. Dias, F. Vincent, G. Pell, J. Prates, M. Centeno et al., Mannosidase 5A, Journal of Biological Chemistry, vol.11, issue.24, pp.25517-25526, 2004.
DOI : 10.1107/S0021889891004399

S. Cutfield, G. Davies, G. Murshudov, B. Anderson, P. Moody et al., The structure of the exo-??-(1,3)-glucanase from Candida albicans in native and bound forms: relationship between a pocket and groove in family 5 glycosyl hydrolases 1 1Edited by I. A. Wilson, Journal of Molecular Biology, vol.294, issue.3, pp.771-783, 1999.
DOI : 10.1006/jmbi.1999.3287

E. Duenas-santero, A. Martin-cuadrado, T. Fontaine, J. Latge, F. Del-rey et al., Characterization of Glycoside Hydrolase Family 5 Proteins in Schizosaccharomyces pombe, Eukaryotic Cell, vol.9, issue.11, pp.1650-1660, 2010.
DOI : 10.1128/EC.00187-10

S. Schmidt, S. Rainieri, S. Witte, U. Matern, and S. Martens, ABSTRACT, Applied and Environmental Microbiology, vol.77, issue.5, pp.1751-1757, 2011.
DOI : 10.1128/AEM.01125-10

Y. Ishibashi, K. Ikeda, K. Sakaguchi, N. Okino, R. Taguchi et al., by Endoglycoceramidase-related Protein 1 (EGCrP1), Journal of Biological Chemistry, vol.128, issue.1, pp.368-381, 2012.
DOI : 10.1074/jbc.M401460200
URL : http://www.jbc.org/content/287/1/368.full.pdf

L. Mazzaferro and J. Breccia, Functional and biotechnological insights into diglycosidases*, Biocatalysis and Biotransformation, vol.325, issue.4, pp.103-112, 2011.
DOI : 10.1080/10286020802513822

L. Mazzaferro, L. Pinuel, M. Minig, and J. Breccia, Extracellular monoenzyme deglycosylation system of 7-O-linked flavonoid ??-rutinosides and its disaccharide transglycosylation activity from Stilbella fimetaria, Archives of Microbiology, vol.66, issue.5, pp.383-393, 2010.
DOI : 10.1016/B978-0-12-372180-8.50042-1

J. Pereira, Z. Chen, R. Mcandrew, R. Sapra, S. Chhabra et al., Biochemical characterization and crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima, Journal of Structural Biology, vol.172, issue.3, pp.372-379, 2010.
DOI : 10.1016/j.jsb.2010.06.018

T. Wu, C. Huang, T. Ko, H. Lai, Y. Ma et al., Diverse substrate recognition mechanism revealed by Thermotoga maritima Cel5A structures in complex with cellotetraose, cellobiose and mannotriose, Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, vol.1814, issue.12, pp.1832-1840, 2011.
DOI : 10.1016/j.bbapap.2011.07.020

S. Voget, H. Steele, and W. Streit, Characterization of a metagenome-derived halotolerant cellulase, Journal of Biotechnology, vol.126, issue.1, pp.26-36, 2006.
DOI : 10.1016/j.jbiotec.2006.02.011

M. Khan, M. Akbar, M. Kitaoka, and K. Hayashi, A unique thermostable lichenase from Thermotoga maritima MSB8 with divergent substrate specificity, Indian J Biotechnol, vol.6, pp.315-320, 2007.

Y. Han, D. Dodd, C. Hespen, S. Ohene-adjei, C. Schroeder et al., Comparative Analyses of Two Thermophilic Enzymes Exhibiting both ??-1,4 Mannosidic and ??-1,4 Glucosidic Cleavage Activities from Caldanaerobius polysaccharolyticus, Journal of Bacteriology, vol.192, issue.16, pp.4111-4121, 2010.
DOI : 10.1128/JB.00257-10

W. Wang and J. Thomson, Nucleotide sequence of thecelA gene encoding a cellodextrinase ofRuminococcus flavefaciens FD-1, MGG Molecular & General Genetics, vol.54, issue.2-3, pp.265-269, 1990.
DOI : 10.1007/BF00633827

H. Matsui, K. Ogata, K. Tajima, T. Nagamine, M. Nakamura et al., Cloning, Expression, and Characterization of a Cellulase Gene from Prevotella ruminicola, Nihon Chikusan Gakkaiho, vol.72, issue.5, pp.421-426, 2001.
DOI : 10.2508/chikusan.72.421

N. Singh and V. Shanmugam, Cloning and characterization of a bifunctional glycosyl hydrolase from an antagonistic Pseudomonas putida strain P3(4), Journal of Basic Microbiology, vol.410, issue.2, pp.340-349, 2012.
DOI : 10.1016/0005-2744(75)90215-6

J. Graham, M. Clark, D. Nadler, S. Huffer, H. Chokhawala et al., Identification and characterization of a multidomain hyperthermophilic cellulase from an archaeal enrichment, Nature Communications, vol.181, p.375, 2011.
DOI : 10.1016/j.ymeth.2004.10.003

U. Temuujin, J. Kim, J. Kim, B. Lee, and H. Kang, Identification of novel pathogenicity-related cellulase genes in Xanthomonas oryzae pv. oryzae, Physiological and Molecular Plant Pathology, vol.76, issue.2, pp.152-157, 2011.
DOI : 10.1016/j.pmpp.2011.08.004

L. Bahari, Y. Gilad, I. Borovok, H. Kahel-raifer, B. Dassa et al., Glycoside hydrolases as components of putative carbohydrate biosensor proteins in Clostridium thermocellum, Journal of Industrial Microbiology & Biotechnology, vol.59, issue.7, pp.825-832, 2011.
DOI : 10.1042/0264-6021:3420105

A. Durand, R. Hughes, A. Roussel, R. Flatman, B. Henrissat et al., Emergence of a subfamily of xylanase inhibitors within glycoside hydrolase family 18, FEBS Journal, vol.12, issue.7, pp.1745-1755, 2005.
DOI : 10.1128/MCB.5.12.3376

P. Qasba and S. Kumar, Molecular Divergence of Lysozymes and ??-Lactalbumin, Critical Reviews in Biochemistry and Molecular Biology, vol.190, issue.4, pp.255-306, 1997.
DOI : 10.1006/bbrc.1993.1159

M. Sinnott, Catalytic mechanism of enzymic glycosyl transfer, Chemical Reviews, vol.90, issue.7, pp.1171-1202, 1990.
DOI : 10.1021/cr00105a006

R. Edgar, Search and clustering orders of magnitude faster than BLAST, Bioinformatics, vol.22, issue.19, pp.2460-2461, 2010.
DOI : 10.1093/bioinformatics/btl158

R. Edgar, MUSCLE: multiple sequence alignment with high accuracy and high throughput, Nucleic Acids Research, vol.32, issue.5, pp.1792-1797, 2004.
DOI : 10.1093/nar/gkh340
URL : https://academic.oup.com/nar/article-pdf/32/5/1792/7055030/gkh340.pdf

M. Price, P. Dehal, and A. Arkin, FastTree 2 ??? Approximately Maximum-Likelihood Trees for Large Alignments, PLoS ONE, vol.5, issue.3, p.9490, 2010.
DOI : 10.1371/journal.pone.0009490.s003

S. Altschul, T. Madden, A. Schaffer, J. Zhang, Z. Zhang et al., Gapped BLAST and PSI-BLAST: a new generation of protein database search programs, Nucleic Acids Research, vol.25, issue.17, pp.3389-3402, 1997.
DOI : 10.1093/nar/25.17.3389

S. Guindon and O. Gascuel, A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood, Systematic Biology, vol.52, issue.5, pp.696-704, 2003.
DOI : 10.1080/10635150390235520
URL : https://academic.oup.com/sysbio/article-pdf/52/5/696/19503129/52-5-696.pdf