Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

Robert Edwards (1) , Alejandro Vega (2) , Holly Norman , Maria Ohaeri , Kyle Levi , Elizabeth Dinsdale (1) , Ondrej Cinek , Ramy Aziz , Katelyn Mcnair , Jeremy Barr , Kyle Bibby , Stan Brouns , Adrian Cazares , Patrick de Jonge , Christelle Desnues (3, 4) , Samuel Díaz Muñoz , Peter Fineran , Alexander Kurilshikov , Rob Lavigne (5) , Karla Mazankova , David Mccarthy (6) , Franklin Nobrega , Alejandro Reyes Muñoz , German Tapia , Nicole Trefault , Alexander Tyakht , Pablo Vinuesa , Jeroen Wagemans , Alexandra Zhernakova (7) , Frank Aarestrup , Gunduz Ahmadov , Abeer Alassaf , Josefa Anton , Abigail Asangba , Emma Billings , Adrian Cantu , Jane Carlton , Daniel Cazares , Gyu-Sung Cho , Tess Condeff , Pilar Cortés , Mike Cranfield , Daniel Cuevas , Rodrigo de La Iglesia (8) , Przemyslaw Decewicz , Michael Doane , Nathaniel Dominy (9) , Lukasz Dziewit , Bashir Mukhtar Elwasila , A. Murat Eren (10) , Charles M. A. P. Franz (11) , Jingyuan Fu , Cristina Garcia-Aljaro , Elodie Ghedin (12) , Kristen Gulino , John Haggerty , Steven Head (13) , Rene S Hendriksen (14) , Colin Hill (15) , Heikki Hyöty , Elena Ilina , Mitchell Irwin , Thomas Jeffries (16) , Juan Jofre , Randall Junge , Scott Kelley (1) , Mohammadali Khan Mirzaei , Martin Kowalewski , Deepak Kumaresan , Steven Leigh , David Lipson (17) , Eugenia Lisitsyna , Montserrat Llagostera , Julia Maritz , Linsey Marr , Angela Mccann (18) , Shahar Molshanski-Mor , Sílvia Monteiro (19) , Benjamin Moreira-Grez , Megan Morris , Lawrence Mugisha , Maite Muniesa (20) , Horst H. Neve (21) , Nam-Phuong Nguyen , Olivia Nigro , Anders Nilsson (22) , Taylor O’connell , Rasha Odeh , Andrew Oliver , Maria Piuri , Aaron Prussin Ii , Udi Qimron , Zhe-Xue Quan , Petra Rainetova , Adán Ramírez-Rojas , Raul Raya , Kim Reasor , Gillian Rice (23) , Alessandro Rossi (24) , Ricardo Santos (25) , John Shimashita , Elyse Stachler , Lars Stene , Ronan Strain , Rebecca Stumpf , Pedro Torres (26) , Alan Twaddle , Maryann Ugochi Ibekwe , Nicolás Villagra (27) , Stephen Wandro , Bryan White (28) , Andy White (29) , Katrine White , Cisca Wijmenga (30) , Maria Zambrano , Henrike Zschach , Bas E Dutilh (31)

1 SDSU - San Diego State University
2 CONICET - Consejo Nacional de Investigaciones Científicas y Técnicas [Buenos Aires]
3 MEPHI - Microbes évolution phylogénie et infections
4 MIO - Institut méditerranéen d'océanologie
5 Laboratory of Gene Technology
6 Monash University [Clayton]
7 UMCG - University Medical Center Groningen [Groningen]
8 COPAS - Centro de Investigación Oceanográfica en el Pacífico Sur Oriental
9 Dartmouth College [Hanover]
10 MBL - Marine Biological Laboratory
11 Department of Safety and Quality of Fruit and Vegetables
12 Department of Parasite and Virus Genomics
13 The Scripps Research Institute [La Jolla, San Diego]
14 DTU - Danmarks Tekniske Universitet = Technical University of Denmark
15 QUB - Queen's University [Belfast]
16 HIE - Hawkesbury Institute for the Environment [Richmond]
17 CREW - CREW - Center for Research on the English-speaking World - EA 4399
18 School of Microbiology
19 Université du Cap-Vert
20 Department of Microbiology [University of Barcelona]
21 Dept Microbiol & Biotechnol
22 Department of Pharmaceutical Biosciences
23 University of Manchester [Manchester]
24 ETH Zürich - Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich]
25 Getulio Vargas Foundation
26 Centro Geofísico de Canarias
27 Laboratorio de Patogénesis Molecular y Antimicrobianos
28 University of Illinois
29 NSSL - National Severe Storms Laboratory
30 Department of Medical Genetics
31 Utrecht University [Utrecht]

Domains: Life Sciences [q-bio]; Biodiversity; Populations and Evolution [q-bio.PE]; Life Sciences [q-bio]; Ecology, environment; Health; Life Sciences [q-bio]; Microbiology and Parasitology; Virology

Robert Edwards, Alejandro Vega, Holly Norman, Maria Ohaeri, Kyle Levi, et al.. Global phylogeography and ancient evolution of the widespread human gut virus crAssphage. Nature Microbiology, 2019, ⟨10.1038/s41564-019-0494-6⟩. ⟨hal-02195894⟩