J. Abrahão, L. Silva, L. S. Silva, J. Y. Khalil, R. Rodrigues et al., Tailed giant tupanvirus possesses the most complete translational apparatus of the known virosphere, Nat. Commun, vol.9, p.749, 2018.

A. C. Andrade, R. A. Rodrigues, G. P. Oliveira, K. R. Andrade, C. A. Bonjardim et al., Filling knowledge gaps for mimivirus entry, uncoating, and morphogenesis, J. Virol, vol.91, pp.1335-1352, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01730467

R. Barrangou, C. Fremaux, H. Deveau, M. Richards, P. Boyaval et al., CRISPR provides acquired resistance against viruses in prokaryotes, Science, vol.315, pp.1709-1712, 2007.

M. Bekliz, A. Levasseur, B. La-scola, and D. Raoult, The defense system Mimivire in Mimivirus illustrates Red Queen hypothesis, Med. Sci, vol.32, pp.818-819, 2016.

J. Claverie, Mimivirus gene promoters exhibit an unprecedented conservation among all eukaryotes, Proc. Natl. Acad. Sci. U.S.A, vol.102, pp.14689-14693, 2005.
URL : https://hal.archives-ouvertes.fr/hal-00004653

J. Claverie, A. , and C. , Mimivirus and its Virophage, Annu. Rev. Genet, vol.43, pp.49-66, 2009.

J. M. Claverie, A. , and C. , CRISPR-Cas-like system in giant viruses: why MIMIVIRE is not likely to be an adaptive immune system, Virol. Sin, vol.31, pp.193-196, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01768356

P. Colson, B. La-scola, A. Levasseur, and G. Caetano-anollés, Mimivirus?: leading the way in the discovery of giant viruses of amoebae, Nat. Publ. Gr, vol.15, pp.243-254, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01496188

P. Colson, Y. Ominami, A. Hisada, B. La-scola, and D. Raoult, Giant mimiviruses escape many canonical criteria of the virus definition, Clin. Microbiol. Infect, vol.2, pp.147-154, 2018.
URL : https://hal.archives-ouvertes.fr/hal-02005805

P. Colson, I. Ravaux, C. Tamalet, O. Glazunova, E. Baptiste et al., HIV infection en route to endogenization: two cases, Clin. Microbiol. Infect, vol.20, pp.1280-1288, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01084857

H. Deveau, R. Barrangou, J. E. Garneau, J. Labonté, C. Fremaux et al., Phage response to CRISPR-encoded resistance in Streptococcus thermophilus, J. Bacteriol, vol.190, pp.1390-1400, 2008.

H. Deveau, J. E. Garneau, and S. Moineau, CRISPR/Cas system and its role in phage-bacteria interactions, Annu. Rev. Microbiol, vol.64, pp.475-493, 2010.

C. Dou, M. Yu, Y. Gu, J. Wang, K. Yin et al., Structural and mechanistic analyses reveal a unique Cas4-like protein in the mimivirus virophage resistance element system, vol.3, pp.1-10, 2018.

M. Gaia, S. Benamar, M. Boughalmi, I. Pagnier, O. Croce et al., Zamilon, a novel virophage with Mimiviridae host specificity, PLoS One, vol.9, p.94923, 2014.

M. Gaia, I. Pagnier, A. Campocasso, G. Fournous, D. Raoult et al., Broad spectrum of mimiviridae virophage allows its isolation using a mimivirus reporter, PLoS One, vol.8, p.61912, 2013.

P. Horvath and R. Barrangou, CRISPR/Cas, the immune system of bacteria and archaea, Science, vol.327, pp.167-170, 2010.

F. V. Karginov and G. J. Hannon, The CRISPR system: small RNA-guided defense in bacteria and archaea, Mol. Cell, vol.37, pp.1-23, 2010.

E. V. Koonin and K. S. Makarova, CRISPR-Cas: an adaptive immunity system in prokaryotes, Biol. Rep, vol.6, pp.1-6, 1000.

E. V. Koonin, K. S. Makarova, and Y. I. Wolf, Evolutionary genomics of defense systems in archaea and bacteria, Annu. Rev. Microbiol, vol.71, pp.233-261, 2016.

L. Scola, B. Audic, S. Robert, C. Jungang, L. De-lamballerie et al., A giant virus in amoebae, Science, vol.299, p.2033, 2003.

L. Scola, B. Campocasso, A. N'dong, R. Fournous, G. Barrassi et al., Tentative characterization of new environmental giant viruses by MALDI-TOF mass spectrometry, Intervirology, vol.53, pp.344-353, 2010.

L. Scola, B. Desnues, C. Pagnier, I. Robert, C. Barrassi et al., The virophage as a unique parasite of the giant mimivirus, Nature, vol.455, pp.100-104, 2008.
URL : https://hal.archives-ouvertes.fr/hal-00354651

A. Levasseur, M. Bekliz, E. Chabrière, P. Pontarotti, B. La-scola et al., MIMIVIRE is a defence system in mimivirus that confers resistance to virophage, Nature, vol.531, pp.249-252, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01306166

K. S. Makarova, S. J. Brouns, P. Horvath, D. F. Sas, and Y. I. Wolf, Evolution and classificationof the CRISPR-Cas system, Nat. Rev, vol.9, pp.467-477, 2011.

V. Moal, W. Kodangasse, S. Aherfi, Y. Berland, D. Raoult et al., Mimivirus in the urine of a kidney-transplant recipient, Clin. Microbiol. Infect, vol.24, pp.561-563, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01791580

J. Orlowski and J. M. Bujnicki, Structural and evolutionary classification of Type II restriction enzymes based on theoretical and experimental analyses, Nucleic Acids Res, vol.36, pp.3552-3569, 2008.

D. Raoult, S. Audic, C. Robert, C. Abergel, P. Renesto et al., The 1.2-megabase genome sequence of mimivirus, Science, vol.306, pp.1344-1350, 2004.
URL : https://hal.archives-ouvertes.fr/hal-00651656

F. Rohwer and R. V. Thurber, Viruses manipulate the marine environment, Nature, vol.459, pp.207-212, 2009.

K. D. Seed, D. W. Lazinski, S. B. Calderwood, and A. Camilli, A bacteriophage encodes its own CRISPR/Cas adaptive response to evade host innate immunity, Nature, vol.494, pp.489-491, 2013.

R. Sorek, V. Kunin, and P. Hugenholtz, Phages are the most abundant forms of life on Earth, Nat. Rev. Microbiol, vol.6, pp.181-186, 2008.

C. A. Suttle, Viruses in the sea, Nature, vol.437, pp.356-361, 2005.

C. A. Suttle, Marine viruses -Major players in the global ecosystem, Nat. Rev. Microbiol, vol.5, pp.801-812, 2007.
URL : https://hal.archives-ouvertes.fr/hal-01663342

M. Suzan-monti, B. La-scola, L. Barrassi, L. Espinosa, and D. Raoult, Ultrastructural characterization of the giant volcano-like virus factory of Acanthamoeba polyphaga mimivirus, PLoS One, vol.2, p.328, 2007.

R. E. Tarlinton, J. Meers, Y. , and P. R. , Retroviral invasion of the koala genome, Nature, vol.442, pp.79-81, 2006.

J. Van-der-oost, M. M. Jore, E. R. Westra, M. Lundgren, and S. J. Brouns, CRISPR-based adaptive and heritable immunity in prokaryotes, Trends Biochem. Sci, vol.34, pp.401-407, 2009.