Assessment of network module identification across complex diseases

Sarvenaz Choobdar , Mehmet Ahsen , Jake Crawford , Mattia Tomasoni , Tao Fang , David Lamparter , Junyuan Lin , Benjamin Hescott , Xiaozhe Hu , Johnathan Mercer , Ted Natoli , Rajiv Narayan , Fabian Aicheler , Nicola Amoroso , Alex Arenas , Karthik Azhagesan , Aaron Baker , Michael Banf , Serafim Batzoglou , Anaïs Baudot (1, 2) , Roberto Bellotti , Keith A. Boroevich , Christine Brun (3) , Stanley Cai , Michael Caldera , Alberto Calderone , Gianni Cesareni , Weiqi Chen , Christine Chichester , Hongzhu Cui , Phuong Dao , Manlio De Domenico , Andi Dhroso , Gilles Didier , Mathew Divine , Antonio Del Sol , Xuyang Feng , Jose C. Flores-Canales , Santo Fortunato , Anthony Gitter , Anna Gorska , Yuanfang Guan , Alain Guénoche (1) , Sergio Gómez , Hatem Hamza , András Hartmann , Shan He , Anton Heijs , Julian Heinrich , Ying Hu , Xiaoqing Huang , V. Keith Hughitt , Minji Jeon , Lucas Jeub , Nathan T. Johnson , Keehyoung Joo , Insuk Joung , Sascha Jung , Susana G. Kalko , Piotr J. Kamola , Jaewoo Kang , Benjapun Kaveelerdpotjana , Minjun Kim , Yoo-Ah Kim , Oliver Kohlbacher , Dmitry Korkin , Kiryluk Krzysztof , Khalid Kunji , Zoltàn Kutalik , Sean Lang-Brown , Thuc Duy Le , Jooyoung Lee , Sunwon Lee , Juyong Lee , Dong Li , Jiuyong Li , Lin Liu , Antonis Loizou , Zhenhua Luo , Artem Lysenko , Tianle Ma , Raghvendra Mall , Tomasoni Mattia , Mario Medvedovic , Jörg Menche , Elisa Micarelli , Alfonso Monaco , Felix Müller , Oleksandr Narykov , Thea Norman , Sungjoon Park , Livia Perfetto , Dimitri Perrin , Stefano Pirrò , Teresa M. Przytycka , Xiaoning Qian , Karthik Raman , Daniele Ramazzotti , Emilie Ramsahai , Balaraman Ravindran , Philip Rennert , Charlotta Schärfe , Roded Sharan , Ning Shi , Wonho Shin , Hai Shu , Himanshu Sinha , Donna K. Slonim , Lionel Spinelli (3) , Suhas Srinivasan , Christine Suver , Damian Szklarczyk , Sabina Tangaro , Suresh Thiagarajan , Laurent Tichit (1) , Thorsten Tiede , Beethika Tripathi , Aviad Tsherniak , Tatsuhiko Tsunoda , Dénes Türei , Ehsan Ullah , Golnaz Vahedi , Alberto Valdeolivas , Jayaswal Vivek , Christian Von Mering , Andra Waagmeester , Bo Wang , Yijie Wang , Barbara A. Weir , Shana White , Sebastian Winkler , Ke Xu , Taosheng Xu , Chunhua Yan , Liuqing Yang , Kaixian Yu , Xiangtian Yu , Gaia Zaffaroni , Mikhail Zaslavskiy , Tao Zeng , Lu Zhang , Weijia Zhang , Lixia Zhang , Xinyu Zhang , Junpeng Zhang , Xin Zhou , Jiarui Zhou , Hongtu Zhu , Junjie Zhu , Guido Zuccon , Aravind Subramanian , Jitao D. Zhang , Gustavo Stolovitzky , Zoltán Kutalik , Kasper Lage , Donna Slonim , Julio Saez-Rodriguez , Lenore Cowen , Sven Bergmann , Daniel Marbach

1 I2M - Institut de Mathématiques de Marseille
2 MMG - Marseille medical genetics - Centre de génétique médicale de Marseille
3 TAGC - Theories and Approaches of Genomic Complexity

Domains: Life Sciences [q-bio]; Life Sciences [q-bio]; Quantitative Methods [q-bio.QM]

Sarvenaz Choobdar, Mehmet Ahsen, Jake Crawford, Mattia Tomasoni, Tao Fang, et al.. Assessment of network module identification across complex diseases. Nature Methods, 2019, 16 (9), pp.843-852. ⟨10.1038/s41592-019-0509-5⟩. ⟨hal-02333148⟩