Narcissus (Amaryllidaceae), la evolución de los polimorfismos florales y la conservación más allá de las "listas rojas, Rev Chil Hist Nat, vol.75, pp.39-55, 2002. ,
Taming the BEAST -a community teaching material resource for BEAST 2, Syst Biol, vol.67, pp.170-174, 2017. ,
The age and diversification of the angiosperms re-revisited, Am J Bot, vol.97, pp.1296-1303, 2010. ,
Systematic position of the anomalous genus Cadia and the phylogeny of the tribe Podalyrieae (Fabaceae), Syst Bot, vol.33, pp.133-147, 2008. ,
BEAST 2: a software platform for Bayesian evolutionary analysis, PLoS Comput Biol, vol.10, p.1003537, 2014. ,
The ecology of differences: assessing community assembly with trait and evolutionary distances, Ecol Lett, vol.16, pp.1234-1244, 2013. ,
Investigations of angiosperms from the Eocene of southeastern North America: samaras of Fraxinus wilcoxiana Berry, Rev Palaeobot Palynol, vol.74, pp.249-266, 1992. ,
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis, Mol Biol Evol, vol.17, pp.540-552, 2000. ,
An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IV, Bot J Linn Soc, vol.181, pp.1-20, 2016. ,
Genus level DNA sequence data for three genes (matK, rbcL, trnH-psbA) for the paper: a comprehensive, genus-level time-calibrated phylogeny of the tree flora of Mediterranean Europe and an assessment of its vulnerability [Data set, 2019. ,
Liriodendron genome sheds light on angiosperm phylogeny and species-pair differentiation, Nat Plants, vol.5, p.18, 2019. ,
The ade4 package I-one-table methods. R News, vol.4, pp.5-10, 2004. ,
URL : https://hal.archives-ouvertes.fr/hal-00427558
Establishing a time-scale for plant evolution, New Phytol, vol.192, pp.266-301, 2011. ,
How deep is the conflict between molecular and fossil evidence on the age of angiosperms?, New Phytol, vol.223, pp.83-99, 2019. ,
Large-scale longitudinal gradients of genetic diversity: a meta-analysis across six phyla in the Mediterranean basin, Ecol Evol, vol.2, pp.2600-2614, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-01232005
Not so ancient: the extant crown group of Nothofagus represents a post-Gondwanan radiation, Pro R Soc B Biol Sci, vol.272, pp.2535-2544, 2005. ,
Cenozoic extinctions account for the low diversity of extant gymnosperms compared with angiosperms, New Phytol, vol.192, pp.997-1009, 2011. ,
An evolutionary ecology of individual differences, Ecol Lett, vol.15, pp.1189-1198, 2012. ,
jModelTest 2: more models, new heuristics and parallel computing, Nat Methods, vol.9, p.772, 2012. ,
Functional traits, the phylogeny of function, and ecosystem service vulnerability, Ecol Evol, vol.3, pp.2958-2975, 2013. ,
Diversification of early angiosperm pollen in a cladistic context, Pollen and spores: patterns of diversification, vol.44, pp.169-195, 1991. ,
Relaxed phylogenetics and dating with confidence, Plos Biol, vol.4, issue.5, p.88, 2006. ,
Can population genetic structure be predicted from life-history traits?, Am Nat, vol.169, pp.662-667, 2007. ,
Seed size, fruit size, and dispersal systems in angiosperms from the early cretaceous to the late tertiary, Am Nat, vol.156, pp.47-58, 2000. ,
Maximum likelihood and minimum-steps methods for estimating evolutionary trees from data on discrete characters, Syst Zool, vol.22, pp.240-249, 1973. ,
Diversification of land plants: insights from a family-level phylogenetic analysis, BMC Evol Biol, vol.11, p.341, 2011. ,
Phylogeny, extinction and conservation: embracing uncertainties in a time of urgency, Philos Trans R Soc Lond B Biol Sci, vol.370, pp.757-760, 2007. ,
Selectivity in Mammalian extinction risk and threat types: a new measure of phylogenetic signal strength in binary traits, Conserv Biol, vol.24, pp.1042-1051, 2010. ,
Adjusting and comparing trees of hierarchical clustering, Bioinformatics, vol.31, issue.22, pp.3718-3720, 2015. ,
SeaView version 4 : a multiplatform graphical user interface for sequence alignment and phylogenetic tree building, Mol Biol Evol, vol.27, pp.221-224, 2010. ,
URL : https://hal.archives-ouvertes.fr/lirmm-00511794
Mapping extrinsic traits such as extinction risks or modelled bioclimatic niches on phylogenies: does it make sense at all? Cladistics, vol.27, pp.181-185, 2011. ,
phylobase: base package for phylogenetic structures and comparative data, 2013. ,
Tree of life reveals clock-like speciation and diversification, Mol Biol Evol, vol.32, pp.835-845, 2015. ,
Discovering the timetree of life, pp.3-18, 2009. ,
Historical effects and sorting processes as explanations for contemporary ecological patterns: character syndromes in Mediterranean woody plants, Am Nat, vol.140, pp.421-446, 1992. ,
The phylogeny and biogeographic history of ashes (Fraxinus, Oleaceae) highlight the roles of migration and vicariance in the diversification of temperate trees, PLoS One, vol.8, p.80431, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-01569388
Accuracy of rate estimation using relaxed-clock models with a critical focus on the early metazoan radiation, Mol Biol Evol, vol.22, pp.1355-1363, 2005. ,
MRBAYES: Bayesian inference of phylogenetic trees, Bioinformatics, vol.17, pp.754-755, 2001. ,
Mammals on the EDGE: conservation priorities based on threat and phylogeny, PLoS One, vol.2, p.296, 2007. ,
Adephylo: New tools for investigating the phylogenetic signal in biological traits, Bioinformatics, vol.26, issue.15, pp.1907-1909, 2010. ,
URL : https://hal.archives-ouvertes.fr/hal-00539508
Testing the value of six taxonomic groups as biodiversity indicators at a local scale, Conserv Biol, vol.18, pp.667-675, 2004. ,
A novel method for rapid multiple sequence alignment based on fast Fourier transform, Nucleic Acids Res, vol.30, pp.3059-3066, 2002. ,
Picante: R tools for integrating phylogenies and ecology, Bioinformatics, vol.26, issue.11, pp.1463-1464, 2010. ,
Facets of phylodiversity: evolutionary diversification, divergence and survival as conservation targets, Philos Trans R Soc Lond B Biol Sci, vol.374, 2018. ,
A two-locus global DNA barcode for land plants: the coding rbcL gene complements the non-coding trnH-psbA spacer region, PLoS One, vol.2, p.508, 2007. ,
A simulation comparison of phylogeny algorithms under equal and unequal evolutionary rates, Mol Biol Evol, vol.11, pp.459-468, 1994. ,
TimeTree: a resource for timelines, timetrees, and divergence times, Mol Biol Evol, vol.34, pp.1812-1819, 2017. ,
In and out of Africa: how did the Strait of Gibraltar affect plant species migration and local diversification?, J Biogeogr, vol.40, pp.24-36, 2013. ,
Numerical ecology. 3rd, p.9780444538680, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-00530195
An overview of extant conifer evolution from the perspective of the fossil record, Am J Bot, vol.105, pp.1531-1544, 2018. ,
Origin of angiosperms and the puzzle of the Jurassic gap, Nat Plants, vol.5, pp.461-470, 2019. ,
Phylogeny and divergence times of gymnosperms inferred from single-copy nuclear genes, PLoS One, vol.9, p.107679, 2014. ,
Using fossils to break long branches in molecular dating: a comparison of relaxed clocks applied to the origin of Angiosperms, Syst Biol, vol.59, pp.384-399, 2010. ,
Land plant evolutionary timeline: gene effects are secondary to fossil constraints in relaxed clock estimation of age and substitution rates, Am J Bot, vol.100, pp.556-573, 2013. ,
A metacalibrated time-tree documents the early rise of flowering plant phylogenetic diversity, New Phytol, vol.207, pp.437-453, 2015. ,
Factors driving the global decline of cycad diversity, AoB Plants, vol.9, pp.22-022, 2017. ,
Distribution of living Cupressaceae reflects the breakup of Pangea, Pro Natl Acad Sci, vol.109, p.7793, 2012. ,
Phylogenetic supermatrix analysis of GenBank sequences from 2228 Papilionoid Legumes, Syst Biol, vol.55, pp.818-836, 2006. ,
What is a tree in the Mediterranean Basin hotspot? A critical analysis, For Ecosyst, vol.6, p.17, 2019. ,
Hot-spots analysis for conservation of plant biodiversity in the Mediterranean Basin, 1997. ,
, , vol.84, pp.112-127
Contemporary richness of holarctic trees and the historical pattern of glacial retreat, Ecography, vol.30, pp.173-182, 2007. ,
Spatial patterns of phylogenetic diversity, Ecol Lett, vol.14, pp.141-149, 2011. ,
Ecophylogenetics: advances and perspectives, Biol Rev, vol.87, pp.769-785, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-00780751
Late cretaceous fossil flowers of ericalean affinity, Am J Bot, vol.80, pp.616-623, 1993. ,
, , 2012.
CAPER: comparative analyses of phylogenetics and evolution in R. R package version 0.5, 2, 458. Pacltová, B. 1966. Pollen grains of angiosperms in the Cenomanian Peruc Formation in, Bohemia. Palaeobotanist, vol.15, pp.52-54, 2013. ,
The evolution and distribution of Normapolles pollen during the Cenophytic, Rev Palaeobot Palynol, vol.35, pp.175-208, 1981. ,
APE: analyses of phylogenetics and evolution in R language, Bioinformatics, vol.20, pp.289-290, 2004. ,
URL : https://hal.archives-ouvertes.fr/ird-01887318
The use of tree comparison metrics, Syst Zool, vol.34, pp.75-82, 1985. ,
Some evolutionary consequences of being a tree, Annu Rev Ecol Evol Syst, vol.37, pp.187-214, 2006. ,
Definition of the Mediterranean region and the origin of its flora, pp.9-24, 1985. ,
, Ecologie et biogéographie des forêts du bassin méditerranéen, 2003.
R: A language and environment for statistical computing, R Foundation for Statistical Computing, 2015. ,
Species diversity in ecological communities: historical and geographical perspectives, 1993. ,
Conservation threats and the phylogenetic utility of IUCN Red List rankings in Incilius toads, Conserv Biol, vol.30, pp.72-81, 2016. ,
Phytotools: phytoplankton production tools. An R package available on CRAN, 2015. ,
Using floristics, modern systematics and phylogenetics for disentangling biodiversity hotspots across scales: a Mediterranean case study, Plant Biosyst, vol.152, pp.1293-1310, 2018. ,
An uncorrelated relaxed-clock analysis suggests an earlier origin for flowering plants, Pro Natl Acad Sci, vol.107, p.5897, 2010. ,
Phylogenetic relationships and character evolution analysis of Saxifragales using a supermatrix approach, Am J Bot, vol.100, pp.916-929, 2013. ,
Phylogenetic diversity and the functioning of ecosystems, Ecol Lett, vol.15, pp.637-648, 2012. ,
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies, Bioinformatics, vol.30, pp.1312-1313, 2014. ,
Distributions of tree comparison metrics: some new results, Syst Biol, vol.42, pp.126-141, 1993. ,
Origin and evolution of the Mediterranean vegetation and climate in Europe, Nature, vol.307, pp.429-432, 1984. ,
Plant evolution in the Mediterranean, 2005. ,
Spatial phylogenetics of the native California flora, BMC Biol, vol.15, pp.1-18, 2017. ,
Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (NC-IUBMB). Enzyme nomenclature. Recommendations 1992. Supplement: corrections and additions, Eu J Biochem, vol.1, p.223, 1994. ,
Phylogenies and community ecology, Annu Rev Ecol Syst, vol.33, pp.475-505, 2002. ,
Using phylogenetic approaches for the analysis of plant breeding system evolution, Annu Rev Ecol Syst, vol.30, pp.167-199, 1999. ,
Phenotypic plasticity and the origins of diversity, Annu Rev Ecol Syst, vol.20, pp.249-278, 1989. ,
Phylogenetic patterns of extinction risk in the eastern arc ecosystems, an African biodiversity hotspot, PLoS One, vol.7, p.47082, 2012. ,
A mathematical theory of evolution, based on the conclusions of, Philos Trans R Soc Lond B Biol Sci, vol.213, pp.21-87, 1925. ,
Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times, Nat Commun, vol.5, p.4956, 2014. ,
, Flora palaestina. Jerusalem: Israel Academy of Sciences and Humanities, 1966.