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Complete genome sequence of Crassaminicella sp. 143-21,isolated from a deep-sea hydrothermal vent

Abstract : Crassaminicella sp. 143-21, a putative new species isolated from deep-sea hydrothermal vent chimney on the Central Indian Ridge (CIR), is an anaerobic, thermophilic and rod-shaped bacterium belonging to the family Clostridiaceae. In this study, we present the complete genome sequence of strain 143-21, comprising 2,756,133 bp with a G + C content of 31.1%. In total, 2427 protein coding genes, 121 tRNA genes and 33 rRNA genes were obtained. Genomic analysis of strain 143-21 revealed that numerous genes related to organic matter transport and catabolism, including peptide transport, amino acid transport, saccharide transport, ethanolamine transport and corresponding metabolic pathways. Further, the genome contains a large proportion of genes involved in translation, ribosomal structure, and signal transduction. These genes might facilitate microbial survival in deep-sea hydrothermal vent environment. The genome of strain 143-21 will be helpful for further understanding its adaptive strategies in the deep-sea hydrothermal vent environment.
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https://hal-amu.archives-ouvertes.fr/hal-03335844
Contributor : Delphine Leroi Connect in order to contact the contributor
Submitted on : Wednesday, September 8, 2021 - 11:03:10 AM
Last modification on : Tuesday, October 19, 2021 - 10:58:57 PM

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Xue-Gong Li, Ze-Xi Jiao, Huan-Huan Zhang, Jun Xu, Wei-Jia Zhang, et al.. Complete genome sequence of Crassaminicella sp. 143-21,isolated from a deep-sea hydrothermal vent. Marine Genomics, Elsevier, 2021, pp.100899. ⟨10.1016/j.margen.2021.100899⟩. ⟨hal-03335844⟩

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