Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2

S. Haridas; R. Albert; M. Binder; J. Bloem; Kurt Labutti; A. Salamov; B. Andreopoulos; S.E. Baker; Kerrie Barry; G. Bills; B.H. Bluhm; C. Cannon; R. Castanera; D.E. Culley; C. Daum; D. Ezra; J.B. González; Bernard Henrissat; A. Kuo; C. Liang; Anna Lipzen; F. Lutzoni; J. Magnuson; S.J. Mondo; M. Nolan; R.A. Ohm; J. Pangilinan; H.-J. Park; L. Ramírez; M. Alfaro; H. Sun; A. Tritt; Y. Yoshinaga; L.-H. Zwiers; B.G. Turgeon; S.B. Goodwin; J.W. Spatafora; P.W. Crous; I.V. Grigoriev; Thirumalaiselvi Ulaganathan; Rong Shi; Deqiang Yao; Ruo-Xu Gu; Marie-Line Garron; Maia Cherney; D Peter Tieleman; Eric Sterner; Guoyun Li; Lingyun Li; Robert Linhardt; Miroslaw Cygler; Niël van Wyk; Michel Drancourt; Laurent Kremer; Otto Miettinen; Robert Riley; Dan Cullen; Ronald de Vries; Matthieu Hainaut; Annele Hatakka; Kristiina Hildén; Rita Kuo; Miia Mäkelä; Laura Sandor; Joseph Spatafora; Igor Grigoriev; David Hibbett

doi:10.1128/genomeA.00976-16

Journal articles

Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2

S. Haridas R. Albert M. Binder ¹ J. Bloem Kurt Labutti ² A. Salamov ³ B. Andreopoulos S.E. Baker Kerrie Barry ⁴ G. Bills B.H. Bluhm C. Cannon R. Castanera D.E. Culley C. Daum D. Ezra J.B. González Bernard Henrissat ⁵ A. Kuo C. Liang Anna Lipzen F. Lutzoni J. Magnuson S.J. Mondo M. Nolan R.A. Ohm J. Pangilinan H.-J. Park L. Ramírez M. Alfaro H. Sun A. Tritt Y. Yoshinaga L.-H. Zwiers B.G. Turgeon S.B. Goodwin J.W. Spatafora P.W. Crous I.V. Grigoriev Thirumalaiselvi Ulaganathan Rong Shi Deqiang Yao Ruo-Xu Gu Marie-Line Garron Maia Cherney D Peter Tieleman Eric Sterner Guoyun Li Lingyun Li Robert Linhardt Miroslaw Cygler Niël van Wyk Michel Drancourt Laurent Kremer Otto Miettinen Robert Riley Dan Cullen Ronald de Vries Matthieu Hainaut ⁵ Annele Hatakka Kristiina Hildén Rita Kuo Miia Mäkelä Laura Sandor Joseph Spatafora Igor Grigoriev David Hibbett

1 CBS-KNAW Fungal Biodiversity Centre

2 US Department of Energy Joint Genome Institute

3 DOE - Department of Energy / Joint Genome Institute

4 United States Department of Energy

5 AFMB - Architecture et fonction des macromolécules biologiques

Abstract : ABSTRACT We report here the first genome sequence of the white-rot fungus Obba rivulosa (Polyporales, Basidiomycota), a polypore known for its lignin-decomposing ability. The genome is based on the homokaryon 3A-2 originating in Finland. The genome is typical in size and carbohydrate active enzyme (CAZy) content for wood-decomposing basidiomycetes.

Keywords : Aulographales Crous Spatafora Haridas & Grigoriev Coniosporiaceae Crous Coniosporiales Crous Eremomycetales Crous Fungal evolution Genome-based prediction Lineolataceae Crous Lineolatales Crous Machine-learning New taxa Rhizodiscinaceae Crous active site crystal structure heparin lyase protein dynamics substrate specificity CAZy database Mycobacterium tuberculosis Rpfs glycoside hydrolase trehalose

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Journal articles

Domain :

Life Sciences [q-bio]

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Submitted on : Monday, January 3, 2022 - 5:56:52 PM
Last modification on : Wednesday, January 5, 2022 - 12:26:02 PM

Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2

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Draft Genome Sequence of the White-Rot Fungus Obba rivulosa 3A-2

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