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The bio.tools registry of software tools and data resources for the life sciences

Jon Ison 1 Hans Ienasescu 1 Piotr Chmura 2 Emil Rydza 2 Hervé Ménager 3 Matúš Kalaš 4 Veit Schwämmle 5 Bjorn Grüning 6 Niall Beard 7 Rodrigo Lopez 8 Severine Duvaud 9 Heinz Stockinger 9 Bengt Persson 10 Radka Svobodová Vařeková 11 Tomáš Raček 11 Jiří Vondrášek 12 Hedi Peterson 13 Ahto Salumets 13 Inge Jonassen 4 Rob Hooft 14 Tommi Nyrönen 15 Alfonso Valencia 16 Salvador Capella 17 Josep Gelpí 17 Federico Zambelli 18 Babis Savakis 19 Brane Leskošek 20 Kristoffer Rapacki 1 Christophe Blanchet 21 Rafael Jimenez 22 Arlindo Oliveira 23 Gert Vriend 24 Olivier Collin 25 Jacques van Helden 26 Peter Løngreen 1 Søren Brunak 1
1 DTU - Technical University of Denmark [Lyngby]
2 KU - University of Copenhagen = Københavns Universitet
3 Hub Bioinformatique et Biostatistique - Bioinformatics and Biostatistics HUB
4 UiB - University of Bergen
5 SDU - University of Southern Denmark
6 Albert-Ludwigs-Universität Freiburg
7 University of Manchester [Manchester]
8 EMBL-EBI - European Bioinformatics Institute [Hinxton]
9 SIB - Swiss Institute of Bioinformatics [Lausanne]
10 Uppsala University
11 CEITEC MU - Central European Institute of Technology [Brno]
12 CAS - Czech Academy of Sciences [Prague]
13 University of Tartu
14 Dutch Techcentre for Life Sciences [Utrecht]
15 CSC-IT - Center for Science
16 ICREA - Institució Catalana de Recerca i Estudis Avançats
17 BSC - CNS - Barcelona Supercomputing Center - Centro Nacional de Supercomputacion
18 Università degli studi di Milano [Milano]
19 BSRC - Biomedical Sciences Research Centre Alexander Fleming [Vari, Greece]
20 University of Ljubljana
21 IFB-CORE - Institut Français de Bioinformatique - UMS CNRS 3601
22 ELIXIR Hub [Cambridge]
23 INESC-ID - Instituto de Engenharia de Sistemas e Computadores Investigação e Desenvolvimento em Lisboa
24 Nijmegen Medical Centre [Nijmegen]
25 Plateforme bioinformatique GenOuest [Rennes]
UR1 - Université de Rennes 1, Plateforme Génomique Santé Biogenouest®, Inria Rennes – Bretagne Atlantique , IRISA-D7 - GESTION DES DONNÉES ET DE LA CONNAISSANCE
26 TAGC - Theories and Approaches of Genomic Complexity
Abstract : Bioinformaticians and biologists rely increasingly upon workflows for the flexible utilization of the many life science tools that are needed to optimally convert data into knowledge. We outline a pan-European enterprise to provide a catalogue ( https://bio.tools ) of tools and databases that can be used in these workflows. bio.tools not only lists where to find resources, but also provides a wide variety of practical information.
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Jon Ison, Hans Ienasescu, Piotr Chmura, Emil Rydza, Hervé Ménager, et al.. The bio.tools registry of software tools and data resources for the life sciences. Genome Biology, BioMed Central, 2019, 20 (164), pp.1-4. ⟨10.1186/s13059-019-1772-6⟩. ⟨hal-02408472⟩

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