Genome analysis of Crassaminicella sp. SY095, an anaerobic mesophilic marine bacterium isolated from a deep-sea hydrothermal vent on the Southwest Indian Ridge

Xue-Gong Li (1, 2) , Wei-Jia Zhang (1, 2) , Xiao-Qing Qi (1, 2) , Long Fei Wu (3, 2)

1 IDSSE - Institute of Deep-Sea Science and Engineering [Chinese Academy of Sciences] [Sanya]
2 LIA-MagMC - International Associated Laboratory of Evolution and Development of Magnetotactic Multicellular Organisms
3 LCB - Laboratoire de chimie bactérienne

Crassaminicella sp. strain SY095 is an anaerobic mesophilic marine bacterium that was recently isolated from a deep-sea hydrothermal vent on the Southwest Indian Ridge. Here, we present the complete genome sequence of strain SY095. The genome consists of a chromosome of 3,046,753 bp (G + C content of 30.81%) and a plasmid of 36,627 bp (G + C content of 31.29%), encodes 2966 protein, 135 tRNA genes, and 34 rRNA genes. Numerous genes are related to peptide transport, amino acid metabolism, motility, and sporulation. This agrees with the observation that strain SY095 is a spore-forming, motile, and chemoheterotrophic bacterium. Further, the genome harbors multiple prophages that carry all the genes necessary for viral particle synthesis. Some prophages carry additional genes that may be involved in the regulation of sporulation. This is the first reported genome of a bacterium from the genus Crassaminicella, providing insights into the microbial adaptation strategies to the deep-sea hydrothermal vent environment.

Keywords: Prophage; Sporulation; Genome sequencing; Chemoheterotroph; Chemoorganotroph; Extreme environment

Domains: Life Sciences [q-bio]

Xue-Gong Li, Wei-Jia Zhang, Xiao-Qing Qi, Long Fei Wu. Genome analysis of Crassaminicella sp. SY095, an anaerobic mesophilic marine bacterium isolated from a deep-sea hydrothermal vent on the Southwest Indian Ridge. Marine Genomics, 2019, pp.100733. ⟨10.1016/j.margen.2019.100733⟩. ⟨hal-02473056⟩