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Differential DNA methylation analysis across the promoter regions using methylated DNA immunoprecipitation sequencing profiling of porcine loin muscle

Kaj Chokeshaiusaha 1 Denis Puthier 2 Thanida Sananmuang 1 Em-On Olanratmanee 1 Catherine Nguyen 2 Roongtham Kedkovid 3
1 Rajamangala University of Technology
2 TAGC - Theories and Approaches of Genomic Complexity
3 Chulalongkorn University [Bangkok]
Abstract : Pork leanness and marbling are among the essential traits of consumer preference. To acquire knowledge about universal epigenetic regulations for improving breed selection, a meta-analysis of methylated DNA immunoprecipitation sequencing (MeDIP-seq) profiling data of mixed loin muscle types was performed in this study.
Keywords : differential DNA methylation lean loin muscle marbled methylated DNA immunoprecipitation sequencing transcription start site
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Kaj Chokeshaiusaha, Denis Puthier, Thanida Sananmuang, Em-On Olanratmanee, Catherine Nguyen, et al.. Differential DNA methylation analysis across the promoter regions using methylated DNA immunoprecipitation sequencing profiling of porcine loin muscle. Veterinary World, Veterinary World, 2020, 13, pp.1113 - 1125. ⟨10.14202/vetworld.2020.1113-1125⟩. ⟨hal-03015708⟩

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